Fix common problems
ZotLit not working as expected? Find what you see on screen and go straight to the fix.
Find what you see on your screen, and the link takes you to the fix.
Installing and connecting
- ZotLit asks me to update Obsidian, but Obsidian says it is up to date — "Update Obsidian to use ZotLit"
- ZotLit does not load at all after I install it — "Failed to load plugin "zotlit""
- ZotLit cannot find my Zotero library; the Library View is empty — "Zotero not found"
- A notice says Zotero is not on this computer — "Zotero wasn't found on this device."
- Live updates do not work; the annotation view does not follow the Zotero reader
- Zotero says to enable the server or select fewer items when I update many papers
- Zotero asks for confirmation every time it opens Obsidian
- I need to send logs with a bug report
Zotero changes and sync
- A change in Zotero does not show in Obsidian
- On Windows (or Linux with ext4), notes and the Library View show old Zotero data
- Zotero changes still do not appear after I install the Companion and update the note
- On a second computer, ZotLit cannot find Zotero after the vault syncs — "Zotero wasn't found on this device."
- My JavaScript (Eta) templates work on one computer but not on another
- After an upgrade, papers from my group libraries do not show in search
Papers, PDFs, and annotations
- A link opens Zotero instead of the PDF
- The PDF does not open, or ZotLit says the file is missing — "This item has no PDF attachment."; "The PDF file is missing."
- I cannot change annotations from Obsidian — "Zotero version is not supported"; "Enable communication with Zotero"; "Waiting for approval in Zotero"
- A comment I wrote disappeared after I edited the same annotation in Zotero
- An annotation shows a lock and I cannot change it — "Locked. Zotero imported this annotation from the PDF file, so it cannot be changed."
Literature notes
- I updated the note, but its body did not change — "Properties updated. This note has no managed region, so its body stayed unchanged."
- Notes from ZotLit v1 do not update — "Properties updated. This note has no managed region, so its body stayed unchanged."
- Updating all notes does nothing and says no library is available — "No library in the library scope is available."
- A picker asks which profile to use when I create a note
- My edits in an imported Zotero note were replaced on refresh
Citations and export
- A citation shows as an error in the References sidebar — "
@keymatches no item in your Zotero library."; "@keymatches multiple items in your Zotero library."; "This link has an invalid citation fragment."; "…points to an item that is no longer in your Zotero library." - ZotLit will not insert a citation — "Citation key
@…matches multiple Zotero items. Change it in Zotero before inserting a citation." - Nothing is inserted when I pick a paper to cite — "Selected item has no citation key: …"
- Copy bibliography is greyed out — "Fix the reference errors to copy the bibliography", "Bibliography formatting is unavailable"
- The References sidebar says the style is unavailable or the references cannot be formatted — "This note's citation and references style is unavailable", "This note's document language is invalid", "ZotLit could not format these references", "The Pandoc engine is unavailable"
- The References sidebar does not match what my note cites
- Export fails or asks me to start Zotero or install the Pandoc engine
- Native Pandoc export stops with an error code
- The citation graph command opens nothing — "The Graph view core plugin is disabled. Turn it on in Settings → Core plugins."; "“Show citations in graph view” is turned off. Turn it on in Settings → ZotLit → Citations."
Templates and queries
- The template preview fails with an error — "Show problem", "Problems", "Copy error report"
- The Problems area lists faults in my profile document — "This file is not a profile document."; "The manifest is not valid."
- Converting my 2.1 templates is refused — "ZotLit kept the legacy templates unchanged …"
- ZotLit will not use my added profile until I convert templates — "Convert the legacy literature note templates before you use an added profile."
- Creating or updating notes fails with a list of inert frontmatter keys
- A query formula shows a warning icon, or the view shows no rows
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